| Protein ZmHB95 | |
|---|---|
|
ZmHB95 is a protein in the Homeobox family.
|
|
| Information | |
| TF Name: | ZmHB95 |
| Species: | Maize |
| TF Family: | Homeobox |
| Gene Name(Synonym): | KNOX3 |
| Uniprot ID: | Q4TUZ8 |
Protein ZmHB95
ZmHB95 is a protein in the Homeobox family.
| Overview of domains present in v5 transcripts | |||||
|---|---|---|---|---|---|
| PF00046 | PF03789 | PF03790 | PF03791 | PF05920 | |
| Zm00001eb055940_T001 |  | | | | |
Protein-DNA Interactions
Meme Logos for Maize v4 Gene IDs
| Gene ID | Type | MEME Logo | Sequence | FIMO | Position |
|---|---|---|---|---|---|
| Zm00001d033861 | DAPseq |  |
sequence | fimo | position |
| Zm00001d033861 | DAPseq |  |
sequence | fimo | position |
| Zm00001d033861 | ChIPseq |  |
sequence | fimo | position |
| Zm00001d033861 | PChIPseq |  |
sequence | fimo | position |
Interactions where ZmHB95 is the regulator
Interactions where ZmHB95 is the target
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Zm00001eb055940_T001 from maize genome v5
Amino Acid Sequence
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MEDLSDLGGHGHPGAAAWRPAAPSLASSSKVSVQVYTVPSSAATGREARGQGVAPMMHASSVAGHGGRAADLDPVKAKIV
SHPSYHRLLAAFLDCHKVGCPPEAAEEIAAVAREREAWQRAAAGDVAHTRPDPELDQFMESYCELLVTWKEELTRPLREA
EEFLTTVEAQLNSITNTGPTMGAFISSAAAADKTGVVDMSDDEQEEGSGMEAEVALGIDPCSDDKELKKQLLRKYSGCLG
NLRKELCKKRKKDKLPKEARQKLLSWWELHYRWPYPSEMEKIALAESTGLEQKQINNWFINQRKRHWKPSEEMQFAVMDG
FHPAPPNAAAFYVDARLVGATPAMFYARPDHGAHHGLWHN
MEDLSDLGGHGHPGAAAWRPAAPSLASSSKVSVQVYTVPSSAATGREARGQGVAPMMHASSVAGHGGRAADLDPVKAKIV
SHPSYHRLLAAFLDCHKVGCPPEAAEEIAAVAREREAWQRAAAGDVAHTRPDPELDQFMESYCELLVTWKEELTRPLREA
EEFLTTVEAQLNSITNTGPTMGAFISSAAAADKTGVVDMSDDEQEEGSGMEAEVALGIDPCSDDKELKKQLLRKYSGCLG
NLRKELCKKRKKDKLPKEARQKLLSWWELHYRWPYPSEMEKIALAESTGLEQKQINNWFINQRKRHWKPSEEMQFAVMDG
FHPAPPNAAAFYVDARLVGATPAMFYARPDHGAHHGLWHN
MEDLSDLGGHGHPGAAAWRPAAPSLASSSKVSVQVYTVPSSAATGREARGQGVAPMMHASSVAGHGGRAADLDPVKAKIV
SHPSYHRLLAAFLDCHKVGCPPEAAEEIAAVAREREAWQRAAAGDVAHTRPDPELDQFMESYCELLVTWKEELTRPLREA
EEFLTTVEAQLNSITNTGPTMGAFISSAAAADKTGVVDMSDDEQEEGSGMEAEVALGIDPCSDDKELKKQLLRKYSGCLG
NLRKELCKKRKKDKLPKEARQKLLSWWELHYRWPYPSEMEKIALAESTGLEQKQINNWFINQRKRHWKPSEEMQFAVMDG
FHPAPPNAAAFYVDARLVGATPAMFYARPDHGAHHGLWHN
MEDLSDLGGHGHPGAAAWRPAAPSLASSSKVSVQVYTVPSSAATGREARGQGVAPMMHASSVAGHGGRAADLDPVKAKIV
SHPSYHRLLAAFLDCHKVGCPPEAAEEIAAVAREREAWQRAAAGDVAHTRPDPELDQFMESYCELLVTWKEELTRPLREA
EEFLTTVEAQLNSITNTGPTMGAFISSAAAADKTGVVDMSDDEQEEGSGMEAEVALGIDPCSDDKELKKQLLRKYSGCLG
NLRKELCKKRKKDKLPKEARQKLLSWWELHYRWPYPSEMEKIALAESTGLEQKQINNWFINQRKRHWKPSEEMQFAVMDG
FHPAPPNAAAFYVDARLVGATPAMFYARPDHGAHHGLWHN
MEDLSDLGGHGHPGAAAWRPAAPSLASSSKVSVQVYTVPSSAATGREARGQGVAPMMHASSVAGHGGRAADLDPVKAKIV
SHPSYHRLLAAFLDCHKVGCPPEAAEEIAAVAREREAWQRAAAGDVAHTRPDPELDQFMESYCELLVTWKEELTRPLREA
EEFLTTVEAQLNSITNTGPTMGAFISSAAAADKTGVVDMSDDEQEEGSGMEAEVALGIDPCSDDKELKKQLLRKYSGCLG
NLRKELCKKRKKDKLPKEARQKLLSWWELHYRWPYPSEMEKIALAESTGLEQKQINNWFINQRKRHWKPSEEMQFAVMDG
FHPAPPNAAAFYVDARLVGATPAMFYARPDHGAHHGLWHN
MEDLSDLGGHGHPGAAAWRPAAPSLASSSKVSVQVYTVPSSAATGREARGQGVAPMMHASSVAGHGGRAADLDPVKAKIV
SHPSYHRLLAAFLDCHKVGCPPEAAEEIAAVAREREAWQRAAAGDVAHTRPDPELDQFMESYCELLVTWKEELTRPLREA
EEFLTTVEAQLNSITNTGPTMGAFISSAAAADKTGVVDMSDDEQEEGSGMEAEVALGIDPCSDDKELKKQLLRKYSGCLG
NLRKELCKKRKKDKLPKEARQKLLSWWELHYRWPYPSEMEKIALAESTGLEQKQINNWFINQRKRHWKPSEEMQFAVMDG
FHPAPPNAAAFYVDARLVGATPAMFYARPDHGAHHGLWHN
MEDLSDLGGHGHPGAAAWRPAAPSLASSSKVSVQVYTVPSSAATGREARGQGVAPMMHASSVAGHGGRAADLDPVKAKIV
SHPSYHRLLAAFLDCHKVGCPPEAAEEIAAVAREREAWQRAAAGDVAHTRPDPELDQFMESYCELLVTWKEELTRPLREA
EEFLTTVEAQLNSITNTGPTMGAFISSAAAADKTGVVDMSDDEQEEGSGMEAEVALGIDPCSDDKELKKQLLRKYSGCLG
NLRKELCKKRKKDKLPKEARQKLLSWWELHYRWPYPSEMEKIALAESTGLEQKQINNWFINQRKRHWKPSEEMQFAVMDG
FHPAPPNAAAFYVDARLVGATPAMFYARPDHGAHHGLWHN
MEDLSDLGGHGHPGAAAWRPAAPSLASSSKVSVQVYTVPSSAATGREARGQGVAPMMHASSVAGHGGRAADLDPVKAKIV
SHPSYHRLLAAFLDCHKVGCPPEAAEEIAAVAREREAWQRAAAGDVAHTRPDPELDQFMESYCELLVTWKEELTRPLREA
EEFLTTVEAQLNSITNTGPTMGAFISSAAAADKTGVVDMSDDEQEEGSGMEAEVALGIDPCSDDKELKKQLLRKYSGCLG
NLRKELCKKRKKDKLPKEARQKLLSWWELHYRWPYPSEMEKIALAESTGLEQKQINNWFINQRKRHWKPSEEMQFAVMDG
FHPAPPNAAAFYVDARLVGATPAMFYARPDHGAHHGLWHN
MEDLSDLGGHGHPGAAAWRPAAPSLASSSKVSVQVYTVPSSAATGREARGQGVAPMMHASSVAGHGGRAADLDPVKAKIV
SHPSYHRLLAAFLDCHKVGCPPEAAEEIAAVAREREAWQRAAAGDVAHTRPDPELDQFMESYCELLVTWKEELTRPLREA
EEFLTTVEAQLNSITNTGPTMGAFISSAAAADKTGVVDMSDDEQEEGSGMEAEVALGIDPCSDDKELKKQLLRKYSGCLG
NLRKELCKKRKKDKLPKEARQKLLSWWELHYRWPYPSEMEKIALAESTGLEQKQINNWFINQRKRHWKPSEEMQFAVMDG
FHPAPPNAAAFYVDARLVGATPAMFYARPDHGAHHGLWHN
MEDLSDLGGHGHPGAAAWRPAAPSLASSSKVSVQVYTVPSSAATGREARGQGVAPMMHASSVAGHGGRAADLDPVKAKIV
SHPSYHRLLAAFLDCHKVGCPPEAAEEIAAVAREREAWQRAAAGDVAHTRPDPELDQFMESYCELLVTWKEELTRPLREA
EEFLTTVEAQLNSITNTGPTMGAFISSAAAADKTGVVDMSDDEQEEGSGMEAEVALGIDPCSDDKELKKQLLRKYSGCLG
NLRKELCKKRKKDKLPKEARQKLLSWWELHYRWPYPSEMEKIALAESTGLEQKQINNWFINQRKRHWKPSEEMQFAVMDG
FHPAPPNAAAFYVDARLVGATPAMFYARPDHGAHHGLWHN
| Secondary Structure Color Code | |
|---|---|
| BEND | region with high backbone curvature without specific hydrogen bonding |
| HELX_LH_PP_P | left-handed polyproline helix |
| HELX_RH_3T_P | right-handed 3-10 helix |
| HELX_RH_AL_P | right-handed alpha helix |
| HELX_RH_PI_P | right-handed pi helix |
| STRN | beta strand |
| TURN_TY1_P | type I turn |
| UNDETERMINED | no data available |
| Domains Present | |
|---|---|
| PF03790 |
|
| PF03791 |
|
| PF03789 |
|
| PF05920 |
|
| PF00046 |
|
| PF03790 |
|
| Hover here to show all domains | |
Nucleotide Sequence
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CCCCTACCCTATACTTCTCTCTAGC...
CCCCTACCCTATACTTCTCTCTAGCTCTATGCGATCTCATCTCATCTCTGTGCCACAGCCAGTCGAATCTCACAGCCACGGTGTGGACCTCCTTTTCGTCTCCACTCTTCCTGTTCCTCTCCTTTTATTTATCCCGAAATTCCACTTTACTATACTGTACTGTAGTACTGCAAAAAGATCTCAAAGCCGAAGCAAACAAATCTCTCGTGCTTAGCCCTAGCTAGCTACTGGTCCTTTTCTTCTCCTCTCCCGTCTTCGTTACTCGGATCACGAAATCTATAGCTACTAATTACTGGCGATGGAGGATCTCTCGGATCTTGGAGGCCACGGCCACCCGGGTGCTGCTGCCTGGCGGCCCGCGGCGCCATCATTGGCGTCCTCTTCCAAGGTCTCGGTGCAAGTCTACACCGTCCCAAGCTCAGCTGCTACCGGCCGTGAAGCCCGAGGTCAAGGTGTTGCACCAATGATGCATGCGTCTAGCGTCGCTGGCCATGGCGGCCGCGCTGCTGATCTAGACCCCGTCAAGGCCAAGATCGTCTCCCACCCTAGCTACCACCGCCTGCTCGCCGCCTTCTTGGACTGCCACAAGGTCGGCTGCCCGCCGGAAGCGGCCGAGGAGATCGCGGCGGTGGCGCGGGAGCGCGAGGCGTGGCAGCGTGCAGCCGCGGGCGACGTCGCGCACACAAGGCCGGACCCGGAGCTCGACCAGTTCATGGAGTCCTACTGCGAGCTGCTTGTGACGTGGAAGGAGGAGCTGACCCGGCCGCTCCGGGAGGCGGAGGAGTTCCTGACGACAGTGGAGGCGCAGCTCAACTCCATTACCAACACCGGGCCAACCATGGGAGCTTTCATCTCTTCAGCTGCAGCTGCAGATAAAACTGGAGTCGTCGATATGTCCGACGATGAACAAGAAGAAGGCAGCGGCATGGAGGCAGAAGTAGCCCTGGGCATCGATCCTTGCTCCGATGACAAGGAGCTCAAGAAGCAGCTCCTCAGGAAATACAGCGGGTGTTTGGGCAACCTGAGAAAGGAGCTGTGCAAGAAGAGGAAGAAAGACAAGCTCCCCAAGGAGGCCCGGCAGAAGCTGCTCAGTTGGTGGGAGCTGCACTACCGATGGCCCTACCCCTCGGAGATGGAGAAGATCGCACTGGCGGAGTCGACGGGGCTGGAGCAGAAGCAGATCAACAACTGGTTCATCAACCAGCGGAAGCGGCACTGGAAGCCGTCGGAGGAGATGCAGTTCGCGGTGATGGATGGGTTCCACCCGGCCCCGCCCAACGCCGCCGCGTTCTACGTCGACGCACGCCTCGTGGGAGCAACGCCGGCGATGTTCTACGCCCGGCCGGATCATGGGGCTCATCATGGCCTCTGGCACAATTGATTCAGCCCACGCACGCTACCATGAAGTATTGAAGTGTGCGCCTGAAAACCTGCATGCATGCCGTAGCTTAATTAGCCTATAAATATGAATGATCTGCACAATGAACTGGAGATCGAGAAAGAACCCTACTGCATTACTGTACCCCCGTTGTTGCACCAAGAAACTTTACATGTCATGAACAGCAAAGACTGTGCCTCCTTAATGCTACAGGTTTGCGGCATTTTGCATATATGATGCTCGTTAAG
GRMZM2G000743_T01 from maize genome v3
Amino Acid Sequence
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MEDLSDLGGHGHPGAAAWRPAAPSLASSSKVSVQVYTVPSSAATGREARGQGVAPMMHASSVAGHGGRAADLDPVKAKIV
SHPSYHRLLAAFLDCHKVGCPPEAAEEIAAVAREREAWQRAAAGDVAHTRPDPELDQFMESYCELLVTWKEELTRPLREA
EEFLTTVEAQLNSITNTGPTMGAFISSAAAAGD
Nucleotide Sequence
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GCTCTATGCGATCTCATCTCATCTC...
GCTCTATGCGATCTCATCTCATCTCTGTGCCACAGCCAGTCGAATCTCACAGCCACGGTGTGGACCTCCTTTTCGTCTCCACTCTTCCTGTTCCTCTCCTTTTATTTATCCCGAAATTCCACTTTACTATACTGTACTGTAGTACTGCAAAAAGATCTCAAAGCCGAAGCAAACAAATCTCTCGTGCTTAGCCCTAGCTAGCTACTGGTCCTTTTCTTCTCCTCTCCCGTCTTCGTTACTCGGATCACGAAATCTATAGCTACTAATTACTGGCGATGGAGGATCTCTCGGATCTTGGAGGCCACGGCCACCCGGGTGCTGCTGCCTGGCGGCCCGCGGCGCCATCATTGGCGTCCTCTTCCAAGGTCTCGGTGCAAGTCTACACCGTCCCAAGCTCAGCTGCTACCGGCCGTGAAGCCCGAGGTCAAGGTGTTGCACCAATGATGCATGCGTCTAGCGTCGCTGGCCATGGCGGCCGCGCTGCTGATCTAGACCCCGTCAAGGCCAAGATCGTCTCCCACCCTAGCTACCACCGCCTGCTCGCCGCCTTCTTGGACTGCCACAAGGTCGGCTGCCCGCCGGAAGCGGCCGAGGAGATCGCGGCGGTGGCGCGGGAGCGCGAGGCGTGGCAGCGTGCAGCCGCGGGCGACGTCGCGCACACAAGGCCGGACCCGGAGCTCGACCAGTTCATGGAGTCCTACTGCGAGCTGCTTGTGACGTGGAAGGAGGAGCTGACCCGGCCGCTCCGGGAGGCGGAGGAGTTCCTGACGACAGTGGAGGCGCAGCTCAACTCCATTACCAACACCGGGCCAACCATGGGAGCTTTCATCTCTTCAGCTGCAGCTGCAGGTGACTAACCTTCAGCTTACTCATTAACGGTCTATAATCCATCAACCATTCACCGGTTAAGTCTATATCAGTTTTACTACCTCATCATATCGGTGAAGTAGTCGCCAGTCGCCACAGTAGCGGATAGCATAGATTAACAGAATTTTCTTTTCTTTCCATGGAAGCGAATACACTGTCAGTGTCGTTGCCTAGCTAGGCAGCAACAAGCACAAAATG
Zm00001d033861_T001 from maize genome v4
Amino Acid Sequence
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MEDLSDLGGHGHPGAAAWRPAAPSLASSSKVSVQVYTVPSSAATGREARGQGVAPMMHASSVAGHGGRAADLDPVKAKIV
SHPSYHRLLAAFLDCHKVGCPPEAAEEIAAVAREREAWQRAAAGDVAHTRPDPELDQFMESYCELLVTWKEELTRPLREA
EEFLTTVEAQLNSITNTGPTMGAFISSAAAADKTGVVDMSDDEQEEGSGMEAEVALGIDPCSDDKELKKQLLRKYSGCLG
NLRKELCKKRKKDKLPKEARQKLLSWWELHYRWPYPSEMEKIALAESTGLEQKQINNWFINQRKRHWKPSEEMQFAVMDG
FHPAPPNAAAFYVDARLVGATPAMFYARPDHGAHHGLWHN
Nucleotide Sequence
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GCTCTATGCGATCTCATCTCATCTC...
GCTCTATGCGATCTCATCTCATCTCTGTGCCACAGCCAGTCGAATCTCACAGCCACGGTGTGGACCTCCTTTTCGTCTCCACTCTTCCTGTTCCTCTCCTTTTATTTATCCCGAAATTCCACTTTACTATACTGTACTGTAGTACTGCAAAAAGATCTCAAAGCCGAAGCAAACAAATCTCTCGTGCTTAGCCCTAGCTAGCTACTGGTCCTTTTCTTCTCCTCTCCCGTCTTCGTTACTCGGATCACGAAATCTATAGCTACTAATTACTGGCGATGGAGGATCTCTCGGATCTTGGAGGCCACGGCCACCCGGGTGCTGCTGCCTGGCGGCCCGCGGCGCCATCATTGGCGTCCTCTTCCAAGGTCTCGGTGCAAGTCTACACCGTCCCAAGCTCAGCTGCTACCGGCCGTGAAGCCCGAGGTCAAGGTGTTGCACCAATGATGCATGCGTCTAGCGTCGCTGGCCATGGCGGCCGCGCTGCTGATCTAGACCCCGTCAAGGCCAAGATCGTCTCCCACCCTAGCTACCACCGCCTGCTCGCCGCCTTCTTGGACTGCCACAAGGTCGGCTGCCCGCCGGAAGCGGCCGAGGAGATCGCGGCGGTGGCGCGGGAGCGCGAGGCGTGGCAGCGTGCAGCCGCGGGCGACGTCGCGCACACAAGGCCGGACCCGGAGCTCGACCAGTTCATGGAGTCCTACTGCGAGCTGCTTGTGACGTGGAAGGAGGAGCTGACCCGGCCGCTCCGGGAGGCGGAGGAGTTCCTGACGACAGTGGAGGCGCAGCTCAACTCCATTACCAACACCGGGCCAACCATGGGAGCTTTCATCTCTTCAGCTGCAGCTGCAGATAAAACTGGAGTCGTCGATATGTCCGACGATGAACAAGAAGAAGGCAGCGGCATGGAGGCAGAAGTAGCCCTGGGCATCGATCCTTGCTCCGATGACAAGGAGCTCAAGAAGCAGCTCCTCAGGAAATACAGCGGGTGTTTGGGCAACCTGAGAAAGGAGCTGTGCAAGAAGAGGAAGAAAGACAAGCTCCCCAAGGAGGCCCGGCAGAAGCTGCTCAGTTGGTGGGAGCTGCACTACCGATGGCCCTACCCCTCGGAGATGGAGAAGATCGCACTGGCGGAGTCGACGGGGCTGGAGCAGAAGCAGATCAACAACTGGTTCATCAACCAGCGGAAGCGGCACTGGAAGCCGTCGGAGGAGATGCAGTTCGCGGTGATGGATGGGTTCCACCCGGCCCCGCCCAACGCCGCCGCGTTCTACGTCGACGCACGCCTCGTGGGAGCAACGCCGGCGATGTTCTACGCCCGGCCGGATCATGGGGCTCATCATGGCCTCTGGCACAATTGATTCAGCCCACGCACGCTACCATGAAGTATTGAAGTGTGCGCCTGAAAACCTGCATGCATGCCGTAGCTTAATTAGCCTATAAATATGAATGATCTGCACAATGAACTGGAGATCGAGAAAGAACCCTACTGCATTACTGTACCCCCGTTGTTGCACCAAGAAACTTTACATGTCATGAACAGCAAAGACTGTGCCTCCTTAATGCTACAGGTTTGCGGCATTTTGCATATA
Zm00001d033861_T002 from maize genome v4
Amino Acid Sequence
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MEDLSDLGGHGHPGAAAWRPAAPSLASSSKVSVQVYTVPSSAATGREARGQGVAPMMHASSVAGHGGRAADLDPVKAKIV
SHPSYHRLLAAFLDCHKARAPIDDPSTLARARAHVGCPPEAAEEIAAVAREREAWQRAAAGDVAHTRPDPELDQFMESYC
ELLVTWKEELTRPLREAEEFLTTVEAQLNSITNTGPTMGAFISSAAAAGD
Nucleotide Sequence
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ATGGAGGATCTCTCGGATCTTGGAG...
ATGGAGGATCTCTCGGATCTTGGAGGCCACGGCCACCCGGGTGCTGCTGCCTGGCGGCCCGCGGCGCCATCATTGGCGTCCTCTTCCAAGGTCTCGGTGCAAGTCTACACCGTCCCAAGCTCAGCTGCTACCGGCCGTGAAGCCCGAGGTCAAGGTGTTGCACCAATGATGCATGCGTCTAGCGTCGCTGGCCATGGCGGCCGCGCTGCTGATCTAGACCCCGTCAAGGCCAAGATCGTCTCCCACCCTAGCTACCACCGCCTGCTCGCCGCCTTCTTGGACTGCCACAAGGCACGCGCGCCGATCGACGACCCTTCAACTTTAGCGCGCGCGCGCGCGCACGTCGGCTGCCCGCCGGAAGCGGCCGAGGAGATCGCGGCGGTGGCGCGGGAGCGCGAGGCGTGGCAGCGTGCAGCCGCGGGCGACGTCGCGCACACAAGGCCGGACCCGGAGCTCGACCAGTTCATGGAGTCCTACTGCGAGCTGCTTGTGACGTGGAAGGAGGAGCTGACCCGGCCGCTCCGGGAGGCGGAGGAGTTCCTGACGACAGTGGAGGCGCAGCTCAACTCCATTACCAACACCGGGCCAACCATGGGAGCTTTCATCTCTTCAGCTGCAGCTGCAGGTGACTAA
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